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Laboratories

This website took root in 2002 in the “joint laboratory” CNRS / Bayer CropScience (BCS, Lyon, France) within the Dr. Dominique Job group (Dr. Loïc Rajjou, Webmaster) who investigates seed biology by proteomic approaches. The joint laboratory CNRS / Bayer CropScience has been created at the instigation of both private and public partners to encourage the development of novel agronomic solutions by the reinforcement of the interactions and exchanges between fundamental and applied research. The joint laboratory CNRS / Bayer CropScience has acquired an internationally recognized expertise in plant, seed, and fungus-physiology, biochemistry and molecular biology. This knowledge and expertise has been applied in the fields of herbicides, fungicides, seed treatments and agronomic and quality traits. Because of the status of this laboratory, research actions have always been planned in common, taking into account interest of both public and private partners. This success is due to a volunteer effort for developing pluri-disciplinary approaches involving researchers of different cultures, acting on common projects. This web interface presents seed proteomics data obtained in this laboratory from 2001 to 2007. From 2007, this website includes also seed proteomic data obtained in the Pr. Marc Jullien group in the within the laboratory of seed biology “INRA / AgroParisTech”. Since 2010, this website is incremented by seed proteomic data generated by the Loïc Rajjou's research activities within the Jean Pierre Bourgin Institute (IJPB, UMR1318 INRA/AgroParisTech).

 

Selected seed proteomic papers published by Jean-Pierre Bourgin Institute

(IJPB, UMR1318 INRA/AgroParisTech)


2013

 

Lounifi I, Arc E, Molasiotis A, Job D, Rajjou L, Tanou G (2013) Interplay between protein carbonylation and nitrosylation in plants. Accepted in Proteomics, issue 4 of Volume 13 (February 2013), doi: 10.1002/pmic.201200304, In press

 

2012

 

Arc E, Chibani K, Grappin P, Jullien M, Godin B, Cueff G, Valot B, Balliau T, Job D, Rajjou L (2012) Cold stratification and exogenous nitrates entail similar functional proteome adjustments during Arabidopsis seed dormancy release. J Proteome Res, 11:5418-5432.

 

Galland M, Job D and Rajjou L (2012) The seed proteome web portal. Front. Plant Sci, 3:98

 

Rajjou L, Duval M, Gallardo K, Catusse J, Bally J, Job C, Job D (2012) Seed Germination and Vigor. Annu Rev Plant Biol, 63:507-533

 

2011

 

Arc E, Galland M, Cueff G, Godin B, Lounifi I, Job D, Rajjou L (2011) Reboot the system thanks to protein posttranslational modifications and proteome diversity: How quiescent seeds restart their metabolism to prepare seedling establishment. Proteomics, 11: 1606-1618.

 

Rajjou L, Belghazi M, Catusse J, Ogé L, Arc E, Godin B, Chibani K, Ali-Rachidi S, Collet B, Grappin P, Jullien M, Gallardo K, Job C, Job D (2011) Proteomics and Post-Translational Proteomics of Seed Dormancy and Germination. Methods Mol Biol. 773: 215-36.

 

2010

 

North H, Baud S, Debeaujon I, Dubos C, Dubreucq B, Grappin P, Jullien M, Lepiniec L, Marion-Poll A, Miquel M, Rajjou L, Routaboul JM, Caboche M (2010) Arabidopsis seed secrets unravelled after a decade of genetic and omics-driven research. Plant J. 61: 971-981.

 

 

Selected seed proteomic papers published by Laboratory of Seed Biology

(LBS, UMR204 INRA/AgroParisTech)

 

2009

Sugliani M, Rajjou L, Clerkx EJM, Koornneef M, Soppe WJJ (2009) Natural modifiers of seed longevity in the Arabidopsis mutants abi3-5 and lec1-3. New Phytol. 184: 898-908.

Tanou G, Job C, Rajjou L, Arc E, Belghazi M, Diamantidis G, Molassiotis A, Job D (2009) Proteomics reveals the overlapping roles of hydrogen peroxide and nitric oxide in the acclimation of citrus plants to salinity. Plant J. 60: 795-804.


2008

 

Rajjou L, Lovigny Y, Groot SP, Belghazi M, Job C, Job D (2008) Proteome-wide characterization of seed aging in Arabidopsis. A comparison between artificial and natural aging protocols. Plant Physiology, 148: 620-641

 

Rajjou L, Debeaujon I (2008) Seed longevity: Survival and maintenance of high germination ability of dry seeds. C. R. Biol. 331: 796-805.

 

2006

 

Chibani K, Ali-Rachedi S, Job C, Job D, Jullien M, Grappin P (2006) Proteomic analysis of seed dormancy in Arabidopsis. Plant Physiology 142, 1493-1510.

 

 

Selected seed proteomic papers published by the “Joint laboratory CNRS / Bayer CropScience”

2008

Holdsworth MJ, Finch-Savage WE, Grappin P, Job D (2008) Post-genomics dissection of seed dormancy and germination. Trends in Plant Science 13, 7-13.

2007

Oracz K, El-Maarouf Bouteau H, Farrant JM, Cooper K, Belghazi M, Job C, Job D, Corbineau F, Bailly C (2007) ROS production and protein oxidation as a novel mechanism for seed dormancy alleviation. The Plant Journal 50: 452-465.

Rajjou L, Miché L, Huguet R, Job C, Job D (2007) The use of proteome and transcriptome profiling in the understand of seed germination and identification of intrinsic markers determining seed quality, germination efficiency and early seedling vigor. In Adkins SW, Ahmore S, Navie S (eds) Seeds. Biology. Development and Ecology, CAB International publishing, Cambridge, USA, pp 149-158

Rajjou L, Lovigny Y, Job C, Belghazi M, Groot SPC, Job D (2007) Seed quality and germination. In Adkins SW, Ahmore S, Navie S (eds) Seeds. Biology. Development and Ecology, CAB International publishing, Cambridge, USA, pp. 324-332.

2006

Rajjou L, Belghazi M, Huguet R, Robin C, Moreau A, Job C, Job D (2006) Proteomic investigation of the effect of salicylic acid on Arabidopsis seed germination and establishment of early defense mechanisms. Plant Physiology 141, 910-923.

Rajjou L, Gallardo K, Job C, Job D (2006) Proteomics of seed development. In Finnie C (ed) Plant proteomics, Annual Plant Reviews 28. Blackwell publishing, Oxford, pp. 151-184.

2005

Job C, Rajjou L, Lovigny Y, Belghazi M, Job D (2005) Patterns of Protein Oxidation in Arabidopsis Seeds and during Germination. Plant Physiol138, 790-802

2004


Rajjou L, Gallardo K, Debeaujon I, Vandekerckhove J, Job C, Job D (2004) The effect of alpha-amanitin on the Arabidopsis seed proteome highlights the distinct roles of stored and neosynthesized mRNAs during germination. Plant Physiol 134, 1598-1613

2002

Gallardo K, Job C, Groot SPC, Puype M, Demol H, Vandekerckhove J, Job D (2002) Proteomics of Arabidopsis seed germination. A comparative study of wild type and gibberellin deficient seeds. Plant Physiol 129, 823-837

Gallardo K, Job C, Groot SPC, Puype M, Demol H, Vandekerckhove J, Job D (2002) Importance of methionine biosynthesis for Arabidopsis seed germination and seedling growth. Physiol Plant 116, 238-247

2001

Gallardo K, Job C, Groot SPC, Puype M, Demol H, Vandekerckhove J, Job D (2001) Proteomic analysis of Arabidopsis seed germination and priming. Plant Physiol 126, 835-848

Job C, Laugel S, Duval M, Gallardo K, Job D (2001) Biochemical characterization of atypical biotinylation domains in plant proteins. Seed Science Research 11, 149-161


Adress

Institut Jean Pierre Bourgin
(IJPB, UMR 1318 INRA/AgroParisTech)
Centre INRA de Versailles
Route de St-Cyr
78026 Versailles cedex - FRANCE

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